HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641678.35333-NODE-35333-length-2336-cov-3.838229|viral_sequence ERZ2641678.35333-NODE-35333-length-2336-cov-3.838229 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641678.360-NODE-360-length-60566-cov-7.153592|prophage-18226:39083 ERZ2641678.360-NODE-360-length-60566-cov-7.153592 prophage Viewing
Cluster representative of 16 other viral fragments. View cluster
ERZ2641678.36968-NODE-36968-length-2249-cov-7.542388|viral_sequence ERZ2641678.36968-NODE-36968-length-2249-cov-7.542388 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641678.38425-NODE-38425-length-2179-cov-2.301318|viral_sequence ERZ2641678.38425-NODE-38425-length-2179-cov-2.301318 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641678.38927-NODE-38927-length-2155-cov-3.448095|viral_sequence ERZ2641678.38927-NODE-38927-length-2155-cov-3.448095 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641678.39007-NODE-39007-length-2151-cov-4.386450|viral_sequence ERZ2641678.39007-NODE-39007-length-2151-cov-4.386450 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641678.39138-NODE-39138-length-2144-cov-3.087602|viral_sequence ERZ2641678.39138-NODE-39138-length-2144-cov-3.087602 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641678.39232-NODE-39232-length-2139-cov-3.734645|viral_sequence ERZ2641678.39232-NODE-39232-length-2139-cov-3.734645 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641678.3979-NODE-3979-length-14125-cov-35.896731|viral_sequence ERZ2641678.3979-NODE-3979-length-14125-cov-35.896731 viral_sequence Eucampyvirinae View contig
Cluster representative of 11 other viral fragments. View cluster
ERZ2641678.4-NODE-4-length-373423-cov-105.297417|prophage-129079:366007 ERZ2641678.4-NODE-4-length-373423-cov-105.297417 prophage View contig
Cluster representative of 22 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue