HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641668.263-NODE-263-length-62901-cov-19.170178|prophage-33607:53760 ERZ2641668.263-NODE-263-length-62901-cov-19.170178 prophage Viewing
Cluster representative of 5 other viral fragments. View cluster
ERZ2641668.2638-NODE-2638-length-14271-cov-5.706176|viral_sequence ERZ2641668.2638-NODE-2638-length-14271-cov-5.706176 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.26528-NODE-26528-length-2553-cov-17.263811|viral_sequence ERZ2641668.26528-NODE-26528-length-2553-cov-17.263811 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.26561-NODE-26561-length-2551-cov-4.156250|viral_sequence ERZ2641668.26561-NODE-26561-length-2551-cov-4.156250 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.29123-NODE-29123-length-2389-cov-4.475578|viral_sequence ERZ2641668.29123-NODE-29123-length-2389-cov-4.475578 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.29144-NODE-29144-length-2388-cov-3.925847|viral_sequence ERZ2641668.29144-NODE-29144-length-2388-cov-3.925847 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641668.29211-NODE-29211-length-2384-cov-3.054100|viral_sequence ERZ2641668.29211-NODE-29211-length-2384-cov-3.054100 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.29579-NODE-29579-length-2361-cov-69.512142|viral_sequence ERZ2641668.29579-NODE-29579-length-2361-cov-69.512142 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.30097-NODE-30097-length-2332-cov-9.045674|viral_sequence ERZ2641668.30097-NODE-30097-length-2332-cov-9.045674 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641668.30736-NODE-30736-length-2296-cov-3.525658|viral_sequence ERZ2641668.30736-NODE-30736-length-2296-cov-3.525658 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue