HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641609.10449-NODE-10449-length-3149-cov-3.188429|viral_sequence ERZ2641609.10449-NODE-10449-length-3149-cov-3.188429 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641609.10489-NODE-10489-length-3139-cov-3.676394|viral_sequence ERZ2641609.10489-NODE-10489-length-3139-cov-3.676394 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641609.11254-NODE-11254-length-2967-cov-3.843063|viral_sequence ERZ2641609.11254-NODE-11254-length-2967-cov-3.843063 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641609.1133-NODE-1133-length-20451-cov-12.740243|viral_sequence ERZ2641609.1133-NODE-1133-length-20451-cov-12.740243 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641609.12348-NODE-12348-length-2749-cov-6.899035|viral_sequence ERZ2641609.12348-NODE-12348-length-2749-cov-6.899035 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641609.1348-NODE-1348-length-17711-cov-24.105007|viral_sequence ERZ2641609.1348-NODE-1348-length-17711-cov-24.105007 viral_sequence Viewing
Cluster representative of 2 other viral fragments. View cluster
ERZ2641609.143-NODE-143-length-82530-cov-22.136781|prophage-29519:48234 ERZ2641609.143-NODE-143-length-82530-cov-22.136781 prophage View contig
Cluster representative of 39 other viral fragments. View cluster
ERZ2641609.15174-NODE-15174-length-2306-cov-3.211462|viral_sequence ERZ2641609.15174-NODE-15174-length-2306-cov-3.211462 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641609.1613-NODE-1613-length-15322-cov-7.198336_3_356|viral_sequence ERZ2641609.1613-NODE-1613-length-15322-cov-7.198336_3_356 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641609.1688-NODE-1688-length-14814-cov-8.889288|viral_sequence ERZ2641609.1688-NODE-1688-length-14814-cov-8.889288 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue