HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641606.55-NODE-55-length-142308-cov-71.017609|prophage-33641:114975 ERZ2641606.55-NODE-55-length-142308-cov-71.017609 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641606.5582-NODE-5582-length-7028-cov-7.038577|viral_sequence ERZ2641606.5582-NODE-5582-length-7028-cov-7.038577 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641606.5642-NODE-5642-length-6962-cov-5.357319|viral_sequence ERZ2641606.5642-NODE-5642-length-6962-cov-5.357319 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641606.5680-NODE-5680-length-6938-cov-7.730205|viral_sequence ERZ2641606.5680-NODE-5680-length-6938-cov-7.730205 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641606.6-NODE-6-length-236039-cov-10.296885|prophage-155136:198741 ERZ2641606.6-NODE-6-length-236039-cov-10.296885 prophage View contig
Cluster representative of 41 other viral fragments. View cluster
ERZ2641606.6024-NODE-6024-length-6650-cov-6.239424_2_184|viral_sequence ERZ2641606.6024-NODE-6024-length-6650-cov-6.239424_2_184 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641606.6434-NODE-6434-length-6329-cov-5.109181|viral_sequence ERZ2641606.6434-NODE-6434-length-6329-cov-5.109181 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641606.6462-NODE-6462-length-6302-cov-12.218665|viral_sequence ERZ2641606.6462-NODE-6462-length-6302-cov-12.218665 viral_sequence View contig
Cluster representative of 6 other viral fragments. View cluster
ERZ2641606.6546-NODE-6546-length-6249-cov-5.253310|viral_sequence ERZ2641606.6546-NODE-6546-length-6249-cov-5.253310 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641606.660-NODE-660-length-41559-cov-121.813801|viral_sequence ERZ2641606.660-NODE-660-length-41559-cov-121.813801 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue