HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641604.36713-NODE-36713-length-1519-cov-3.801230|viral_sequence ERZ2641604.36713-NODE-36713-length-1519-cov-3.801230 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641604.3693-NODE-3693-length-9544-cov-21.566129|viral_sequence ERZ2641604.3693-NODE-3693-length-9544-cov-21.566129 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641604.37423-NODE-37423-length-1501-cov-3.910097|viral_sequence ERZ2641604.37423-NODE-37423-length-1501-cov-3.910097 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641604.4023-NODE-4023-length-8816-cov-22.298368|viral_sequence ERZ2641604.4023-NODE-4023-length-8816-cov-22.298368 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641604.4049-NODE-4049-length-8771-cov-15.289009|viral_sequence ERZ2641604.4049-NODE-4049-length-8771-cov-15.289009 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2641604.4264-NODE-4264-length-8363-cov-6.654189|viral_sequence ERZ2641604.4264-NODE-4264-length-8363-cov-6.654189 viral_sequence Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2641604.44-NODE-44-length-197065-cov-8.917964|prophage-118977:158756 ERZ2641604.44-NODE-44-length-197065-cov-8.917964 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641604.4421-NODE-4421-length-8105-cov-5.756398|viral_sequence ERZ2641604.4421-NODE-4421-length-8105-cov-5.756398 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641604.4524-NODE-4524-length-7950-cov-6.979607|viral_sequence ERZ2641604.4524-NODE-4524-length-7950-cov-6.979607 viral_sequence View contig
Cluster representative of 8 other viral fragments. View cluster
ERZ2641604.4637-NODE-4637-length-7774-cov-4.250680|viral_sequence ERZ2641604.4637-NODE-4637-length-7774-cov-4.250680 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue