HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641597.4262-NODE-4262-length-7011-cov-302.963053|viral_sequence ERZ2641597.4262-NODE-4262-length-7011-cov-302.963053 viral_sequence Viewing
Cluster representative of 9 other viral fragments. View cluster
ERZ2641597.433-NODE-433-length-53370-cov-62.026728|prophage-42823:53370 ERZ2641597.433-NODE-433-length-53370-cov-62.026728 prophage View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2641597.457-NODE-457-length-52130-cov-14.318521|viral_sequence ERZ2641597.457-NODE-457-length-52130-cov-14.318521 viral_sequence View contig
Cluster representative of 106 other viral fragments. View cluster
ERZ2641597.4769-NODE-4769-length-6202-cov-40.800390|viral_sequence ERZ2641597.4769-NODE-4769-length-6202-cov-40.800390 viral_sequence View contig
Cluster representative of 10 other viral fragments. View cluster
ERZ2641597.4772-NODE-4772-length-6197-cov-39.522631|viral_sequence ERZ2641597.4772-NODE-4772-length-6197-cov-39.522631 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641597.4922-NODE-4922-length-5982-cov-47.483212|viral_sequence ERZ2641597.4922-NODE-4922-length-5982-cov-47.483212 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641597.500-NODE-500-length-49443-cov-56.206204|prophage-1:27748 ERZ2641597.500-NODE-500-length-49443-cov-56.206204 prophage View contig
Cluster representative of 8 other viral fragments. View cluster
ERZ2641597.5002-NODE-5002-length-5859-cov-168.858546|viral_sequence ERZ2641597.5002-NODE-5002-length-5859-cov-168.858546 viral_sequence View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2641597.5109-NODE-5109-length-5718-cov-5.835423|viral_sequence ERZ2641597.5109-NODE-5109-length-5718-cov-5.835423 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641597.560-NODE-560-length-46001-cov-17.442432|viral_sequence ERZ2641597.560-NODE-560-length-46001-cov-17.442432 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue