HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ11806571.2250-NODE-2250-length-1933-cov-3.979766|viral_sequence ERZ11806571.2250-NODE-2250-length-1933-cov-3.979766 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.2684-NODE-2684-length-1683-cov-6.469287|viral_sequence ERZ11806571.2684-NODE-2684-length-1683-cov-6.469287 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.2758-NODE-2758-length-1651-cov-5.723058|viral_sequence ERZ11806571.2758-NODE-2758-length-1651-cov-5.723058 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.3108-NODE-3108-length-1501-cov-10.578147_71_226|viral_sequence ERZ11806571.3108-NODE-3108-length-1501-cov-10.578147_71_226 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.348-NODE-348-length-8390-cov-18.167726|viral_sequence ERZ11806571.348-NODE-348-length-8390-cov-18.167726 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806571.36-NODE-36-length-47280-cov-185.557840|prophage-4331:38604 ERZ11806571.36-NODE-36-length-47280-cov-185.557840 prophage View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ11806571.380-NODE-380-length-7902-cov-6.869504|viral_sequence ERZ11806571.380-NODE-380-length-7902-cov-6.869504 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.388-NODE-388-length-7790-cov-12.185133|viral_sequence ERZ11806571.388-NODE-388-length-7790-cov-12.185133 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.494-NODE-494-length-6237-cov-14.326432|viral_sequence ERZ11806571.494-NODE-494-length-6237-cov-14.326432 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806571.591-NODE-591-length-5437-cov-5.270531|viral_sequence ERZ11806571.591-NODE-591-length-5437-cov-5.270531 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue