HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ11806563.17212-NODE-17212-length-2708-cov-2.836789|viral_sequence ERZ11806563.17212-NODE-17212-length-2708-cov-2.836789 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806563.1766-NODE-1766-length-22571-cov-7.815020|viral_sequence ERZ11806563.1766-NODE-1766-length-22571-cov-7.815020 viral_sequence View contig
Cluster representative of 10 other viral fragments. View cluster
ERZ11806563.1789-NODE-1789-length-22394-cov-109.497560|prophage-8689:21422 ERZ11806563.1789-NODE-1789-length-22394-cov-109.497560 prophage View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ11806563.1799-NODE-1799-length-22306-cov-7.234012|viral_sequence ERZ11806563.1799-NODE-1799-length-22306-cov-7.234012 viral_sequence View contig
Cluster representative of 9 other viral fragments. View cluster
ERZ11806563.1832-NODE-1832-length-21913-cov-10.755833|prophage-79:12502 ERZ11806563.1832-NODE-1832-length-21913-cov-10.755833 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806563.19901-NODE-19901-length-2383-cov-2.526203|viral_sequence ERZ11806563.19901-NODE-19901-length-2383-cov-2.526203 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806563.2018-NODE-2018-length-20044-cov-45.341938|viral_sequence ERZ11806563.2018-NODE-2018-length-20044-cov-45.341938 viral_sequence View contig
Cluster representative of 39 other viral fragments. View cluster
ERZ11806563.20580-NODE-20580-length-2311-cov-2.148493|viral_sequence ERZ11806563.20580-NODE-20580-length-2311-cov-2.148493 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806563.20596-NODE-20596-length-2309-cov-3.520852|viral_sequence ERZ11806563.20596-NODE-20596-length-2309-cov-3.520852 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806563.2077-NODE-2077-length-19571-cov-16.409408|viral_sequence ERZ11806563.2077-NODE-2077-length-19571-cov-16.409408 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue