HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ11806482.556-NODE-556-length-4022-cov-6.462818|viral_sequence ERZ11806482.556-NODE-556-length-4022-cov-6.462818 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806482.572-NODE-572-length-3877-cov-5.947933|viral_sequence ERZ11806482.572-NODE-572-length-3877-cov-5.947933 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806482.589-NODE-589-length-3757-cov-4.731226|viral_sequence ERZ11806482.589-NODE-589-length-3757-cov-4.731226 viral_sequence Arquatrovirinae View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806482.84-NODE-84-length-19159-cov-6.003821|prophage-7291:19159 ERZ11806482.84-NODE-84-length-19159-cov-6.003821 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806483.28-NODE-28-length-41566-cov-9.648792|viral_sequence ERZ11806483.28-NODE-28-length-41566-cov-9.648792 viral_sequence Iridoviridae View contig
Cluster representative of 18 other viral fragments. View cluster
ERZ11806485.1836-NODE-1836-length-2052-cov-2.561342|viral_sequence ERZ11806485.1836-NODE-1836-length-2052-cov-2.561342 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806485.2-NODE-2-length-142753-cov-373.758245|prophage-296:48240 ERZ11806485.2-NODE-2-length-142753-cov-373.758245 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806485.2094-NODE-2094-length-1848-cov-2.292248|viral_sequence ERZ11806485.2094-NODE-2094-length-1848-cov-2.292248 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806485.715-NODE-715-length-4057-cov-7.183908|viral_sequence ERZ11806485.715-NODE-715-length-4057-cov-7.183908 viral_sequence Viewing
Cluster representative of 1 other viral fragment. View cluster
ERZ11806485.943-NODE-943-length-3314-cov-9.680884|viral_sequence ERZ11806485.943-NODE-943-length-3314-cov-9.680884 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue