HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ11806452.3033-NODE-3033-length-1629-cov-5.132147|viral_sequence ERZ11806452.3033-NODE-3033-length-1629-cov-5.132147 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.3081-NODE-3081-length-1606-cov-8.443585|viral_sequence ERZ11806452.3081-NODE-3081-length-1606-cov-8.443585 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.3176-NODE-3176-length-1565-cov-3.282119|viral_sequence ERZ11806452.3176-NODE-3176-length-1565-cov-3.282119 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.318-NODE-318-length-12510-cov-9.135528|viral_sequence ERZ11806452.318-NODE-318-length-12510-cov-9.135528 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ11806452.3286-NODE-3286-length-1523-cov-5.913488|viral_sequence ERZ11806452.3286-NODE-3286-length-1523-cov-5.913488 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.3299-NODE-3299-length-1519-cov-5.928279|viral_sequence ERZ11806452.3299-NODE-3299-length-1519-cov-5.928279 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.3327-NODE-3327-length-1511-cov-4.735577|viral_sequence ERZ11806452.3327-NODE-3327-length-1511-cov-4.735577 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.3341-NODE-3341-length-1508-cov-2.333104|viral_sequence ERZ11806452.3341-NODE-3341-length-1508-cov-2.333104 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806452.34-NODE-34-length-58595-cov-23.247472|prophage-30769:58569 ERZ11806452.34-NODE-34-length-58595-cov-23.247472 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806452.38-NODE-38-length-56546-cov-13.694128|prophage-38672:53647 ERZ11806452.38-NODE-38-length-56546-cov-13.694128 prophage View contig
Cluster representative of 30 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue