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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ11806438.1640-NODE-1640-length-2716-cov-4.188651|viral_sequence ERZ11806438.1640-NODE-1640-length-2716-cov-4.188651 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ11806438.17-NODE-17-length-65280-cov-83.904776|prophage-13113:57696 ERZ11806438.17-NODE-17-length-65280-cov-83.904776 prophage View contig
Cluster representative of 38 other viral fragments. View cluster
ERZ11806438.1813-NODE-1813-length-2373-cov-5.150992|viral_sequence ERZ11806438.1813-NODE-1813-length-2373-cov-5.150992 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806438.1860-NODE-1860-length-2304-cov-6.092486|viral_sequence ERZ11806438.1860-NODE-1860-length-2304-cov-6.092486 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806438.1869-NODE-1869-length-2295-cov-4.555357|viral_sequence ERZ11806438.1869-NODE-1869-length-2295-cov-4.555357 viral_sequence Arquatrovirinae View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ11806438.1941-NODE-1941-length-2187-cov-3.810976|viral_sequence ERZ11806438.1941-NODE-1941-length-2187-cov-3.810976 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806438.2187-NODE-2187-length-1903-cov-4.363095|viral_sequence ERZ11806438.2187-NODE-2187-length-1903-cov-4.363095 viral_sequence Arquatrovirinae Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ11806438.2353-NODE-2353-length-1737-cov-3.745541|viral_sequence ERZ11806438.2353-NODE-2353-length-1737-cov-3.745541 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ11806438.24-NODE-24-length-56514-cov-26.530580|viral_sequence ERZ11806438.24-NODE-24-length-56514-cov-26.530580 viral_sequence Arquatrovirinae View contig
Cluster representative of 167 other viral fragments. View cluster
ERZ11806438.2406-NODE-2406-length-1694-cov-21.482611|viral_sequence ERZ11806438.2406-NODE-2406-length-1694-cov-21.482611 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue