HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112907186: CA04.04D4a_Inflammatory markers

Sample data for SAMEA112907186, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905373
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112907186 Copy API Endpoint
Sample data

Metadata for sample SAMEA112907186, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -0.6623 logfold expression-copies number
IFNγ -1.5401 logfold expression-copies number
IL-1 -2.0636 logfold expression-copies number
IL-10 -4.7199 logfold expression-copies number
IL-12 -3.399 logfold expression-copies number
IL-17 -2.4817 logfold expression-copies number
IL-18 -2.7716 logfold expression-copies number
IL-2 -2.7635 logfold expression-copies number
IL-4 -3.4227 logfold expression-copies number
IL-6 -3.0209 logfold expression-copies number
IL-8 -1.9958 logfold expression-copies number
MUC-2 0.3511 logfold expression-copies number
TGFβ 0.1888 logfold expression-copies number
TNF-α -1.8576 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site caecum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA04.04D4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112907186