HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906826: CA02.01A4a_Inflammatory markers

Sample data for SAMEA112906826, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905076
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906826 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906826, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.814 logfold expression-copies number
IFNγ -2.8497 logfold expression-copies number
IL-1 -2.2653 logfold expression-copies number
IL-10 -3.7121 logfold expression-copies number
IL-12 -2.5575 logfold expression-copies number
IL-17 -2.839 logfold expression-copies number
IL-18 -2.78 logfold expression-copies number
IL-2 -4.2509 logfold expression-copies number
IL-4 -3.8251 logfold expression-copies number
IL-6 -4.0059 logfold expression-copies number
IL-8 -2.047 logfold expression-copies number
MUC-2 0.6173 logfold expression-copies number
TGFβ -0.9961 logfold expression-copies number
TNF-α -2.8579 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA02.01A4a None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906826