HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905076: a HoloFood chicken host

Data available for SAMEA112905076


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has host genomic data Has host genomic data
View 6 derived samples
API endpoint
/api/animals/SAMEA112905076 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905076, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.38 g
Average Daily Feed intake: Day 00 - 35 93.76 g
Average Daily Feed intake: Day 07 - 21 62.64 g
Average Daily Feed intake: Day 21 - 35 168.32 g
Average Daily Gain: Day 00 - 07 18.1 g
Average Daily Gain: Day 00 - 35 58.37 g
Average Daily Gain: Day 07 - 21 49.6 g
Average Daily Gain: Day 21 - 35 87.28 g
Average European Performance Efficiency Factor: Day 00 - 07 164.83 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.263 None
Average Feed to Conversion Ratio: Day 07 - 21 1.263 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 39.67 g
Average body weight at day 07 166.36 g
Average body weight at day 21 860.76 g
Average body weight at day 35 2082.7 g
European Performance Efficiency Factor: Day 00 - 35 354.33 None
European Performance Efficiency Factor: Day 07 - 21 392.76 None
European Performance Efficiency Factor: Day 21 - 35 452.6 None
FCR (not corrected): Day 00 - 07 1.095 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.609 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.928 None
Feed to Conversion Ratio: Day 00 - 07 1.071 g/g
Feed to Conversion Ratio: Day 00 - 35 1.606 g/g
Feed to Conversion Ratio: Day 21 - 35 1.928 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=97.44 P1=2.56 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=80.00 P1=13.33 P2=6.67 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=82.61 P1=8.70 P2=8.70 P3=0.00 P4=0.00 %
Litter at Day 07 7.17 pH
Litter at Day 21 7.31 pH
Litter at Day 35 5.56 pH
Mean Abdominal fat Yield 1.65 %
Mean Abdominal fat weight 40.02 g
Mean Breast Yield 20.47 %
Mean Breast weight 501.4 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1910.9 g
Mean Carcass Yield 77.93 %
Mean HPT at Day 07 0.59161 ng/ml
Mean HPT at Day 21 0.59161 ng/ml
Mean HPT at Day 35 0.75072 ng/ml
Mean LPS at Day 07 2.9732 ng/L
Mean LPS at Day 21 3.0772 ng/L
Mean LPS at Day 35 3.9445 ng/L
Mean Legs Yield 19.98 %
Mean Legs weight 490.7 g
Mean TBARS 0.05 mg MDA/kg
Mean carcass body weight 2451.7 g
Mean feather cortisol at Day 07 7.4533 pg/mg
Mean feather cortisol at Day 21 8.1867 pg/mg
Mean feather cortisol at Day 35 11.195 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 2.5 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CA02 None

Sample metadata

Marker Measurement Units
Animal code CA02.01 None
Breed Ross None
C-Reactive protein 1.04 pg/ml
Chicken body weight 136 g
Feather cortisol 7.66 pg/mg
Haptoglobin 18.95 ng/ml
Lipopolysaccharide 8.76 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None