HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112906824: CA01.01A4a_Inflammatory markers

Sample data for SAMEA112906824, a HoloFood inflammatory-markers chicken sample


Sample details
Animal
Chicken SAMEA112905149
Sample type
Inflammatory markers data icon inflammatory-markers
API endpoint
/api/samples/SAMEA112906824 Copy API Endpoint
Sample data

Metadata for sample SAMEA112906824, stored in BioSamples and ENA.

 Download all as TSV

Ena Checklist metadata

Marker Measurement Units
Organism Gallus gallus None
project HoloFood None

Inflammatory Markers metadata

Marker Measurement Units
CLDN5 -2.9231 logfold expression-copies number
IFNγ -2.977 logfold expression-copies number
IL-1 -3.0355 logfold expression-copies number
IL-10 -3.4904 logfold expression-copies number
IL-12 -2.6696 logfold expression-copies number
IL-17 -3.7893 logfold expression-copies number
IL-18 -2.875 logfold expression-copies number
IL-2 -4.5172 logfold expression-copies number
IL-4 -3.7452 logfold expression-copies number
IL-6 -4.3243 logfold expression-copies number
IL-8 -2.4635 logfold expression-copies number
MUC-2 0.3613 logfold expression-copies number
TGFβ -0.9921 logfold expression-copies number
TNF-α -2.7948 logfold expression-copies number

Sample metadata

Marker Measurement Units
Body site ileum tissue None
Experiment inflammatory_markers None
Organism Chicken None
Project HoloFood None
Sample code CA01.01A4a None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906824