HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905149: a HoloFood chicken host

Data available for SAMEA112905149


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has host genomic data Has host genomic data
View 6 derived samples
API endpoint
/api/animals/SAMEA112905149 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905149, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.5 g
Average Daily Feed intake: Day 00 - 35 101.25 g
Average Daily Feed intake: Day 07 - 21 79.55 g
Average Daily Feed intake: Day 21 - 35 166.38 g
Average Daily Gain: Day 00 - 07 18.41 g
Average Daily Gain: Day 00 - 35 71.41 g
Average Daily Gain: Day 07 - 21 59.81 g
Average Daily Gain: Day 21 - 35 109.51 g
Average European Performance Efficiency Factor: Day 00 - 07 173.89 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.33 None
Average Feed to Conversion Ratio: Day 07 - 21 1.33 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 42.98 g
Average body weight at day 07 171.88 g
Average body weight at day 21 1009.1 g
Average body weight at day 35 2542.3 g
European Performance Efficiency Factor: Day 00 - 35 503.64 None
European Performance Efficiency Factor: Day 07 - 21 449.64 None
European Performance Efficiency Factor: Day 21 - 35 720.83 None
FCR (not corrected): Day 00 - 07 1.059 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.418 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.519 None
Feed to Conversion Ratio: Day 00 - 07 1.059 g/g
Feed to Conversion Ratio: Day 00 - 35 1.418 g/g
Feed to Conversion Ratio: Day 21 - 35 1.519 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=90.32 P1=6.45 P2=3.23 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=54.17 P1=29.17 P2=16.67 P3=0.00 P4=0.00 %
Litter at Day 07 5.61 pH
Litter at Day 21 5.93 pH
Litter at Day 35 6.98 pH
Mean Abdominal fat Yield 1.23 %
Mean Abdominal fat weight 34.73 g
Mean Breast Yield 21.14 %
Mean Breast weight 596.05 g
Mean CRP at Day 07 1.2113 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 2170.1 g
Mean Carcass Yield 77.03 %
Mean HPT at Day 07 0.64711 ng/ml
Mean HPT at Day 21 0.7854 ng/ml
Mean HPT at Day 35 0.66854 ng/ml
Mean LPS at Day 07 2.9732 ng/L
Mean LPS at Day 21 2.9732 ng/L
Mean LPS at Day 35 3.8758 ng/L
Mean Legs Yield 19.68 %
Mean Legs weight 554.57 g
Mean TBARS 0.0367 mg MDA/kg
Mean carcass body weight 2818.3 g
Mean feather cortisol at Day 07 8.56 pg/mg
Mean feather cortisol at Day 21 11.023 pg/mg
Mean feather cortisol at Day 35 18.935 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CA01 None

Sample metadata

Marker Measurement Units
Animal code CA01.01 None
Breed Cobb None
C-Reactive protein 1.8 pg/ml
Chicken body weight 146 g
Feather cortisol 9.37 pg/mg
Haptoglobin 19.72 ng/ml
Lipopolysaccharide 8.02 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None