HoloFood Data Portal
Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112906491, a HoloFood metabolomic-targeted chicken sample
Metadata for sample SAMEA112906491, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Cadaverin | 0 | umol/g digesta |
| Gesamtamine (Total biogenic amines) | 1.567 | umol/g digesta |
| Histamin | 0 | umol/g digesta |
| Putrescin | 0.019 | umol/g digesta |
| Spermidin | 1.536 | umol/g digesta |
| Spermin | 0.013 | umol/g digesta |
| Tyramin | 0 | umol/g digesta |
| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acetic acid | 65.105 | umol/g digesta |
| Acetic:totalFA ratio | 0.709 | None |
| Ammonium | 18.28 | umol/g digesta |
| D-Lactate | 0.02 | umol/g digesta |
| L-Lactate | 2.6 | umol/g digesta |
| L:D lactic ratio | 130 | None |
| Propionic acid | 8.029 | umol/g digesta |
| Propionic:totalFA ratio | 0.054 | None |
| Total SCFAs | 84.032 | umol/g digesta |
| Total branch chain fatty acids | 3.274 | umol/g digesta |
| Total lactate | 2.62 | umol/g digesta |
| i-Butyric acid | 1.844 | umol/g digesta |
| i-Valeric acid | 1.43 | umol/g digesta |
| iButyric:totalFA ratio | 0.008 | None |
| iValeria:totalFA ratio | 0.01 | None |
| n-Butyric acid | 6.743 | umol/g digesta |
| n-Valeric acid | 0.881 | umol/g digesta |
| nButyric:totalFA ratio | 0.211 | None |
| nValeric:totalFA ratio | 0.008 | None |
| Marker | Measurement | Units |
|---|---|---|
| Body site | caecum content | None |
| Experiment | tm | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA23.15F3 | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CC | None |
| Treatment name | Control | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112906491
