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Access samples and data collected and generated by the HoloFood project.
Access samples and data collected and generated by the HoloFood project.
Sample data for SAMEA112905435, a HoloFood histological chicken sample
Metadata for sample SAMEA112905435, stored in BioSamples and ENA.
Download all as TSV| Marker | Measurement | Units |
|---|---|---|
| Organism | Gallus gallus | None |
| project | HoloFood | None |
| Marker | Measurement | Units |
|---|---|---|
| Acidic goblet cell density | 2.56 | per 100um |
| Acidic goblet cell number | 10.39 | None |
| CD3VillusBase | 21.99 | per 1000um squared |
| CD3VillusBaseEP | 20.97 | per 1000um squared |
| CD3VillusBaseLP | 24.94 | per 1000um squared |
| CD3VillusTip | 11.52 | per 1000um squared |
| CD3VillusTipEP | 8.67 | per 1000um squared |
| CD3VillusTipLP | 23.3 | per 1000um squared |
| CD3crypt | 7.91 | per 1000um squared |
| CD3cryptEP | 10.74 | per 1000um squared |
| CD3cryptLP | 5.08 | per 1000um squared |
| Crypt depth | 105.9 | um |
| Epithelial area | 51 | per 1000um squared |
| Mixed goblet cell density | 19.11 | per 100um |
| Mixed goblet cell number | 77.72 | None |
| Total goblet cell density | 21.67 | per 100um |
| Total goblet cell number | 88.12 | None |
| Villus height | 406.7 | um |
| Villus height: crypt depth ratio | 3.84 | um/um |
| Villus width | 125.4 | um |
| Marker | Measurement | Units |
|---|---|---|
| Body site | ileum tissue | None |
| Experiment | histology | None |
| Organism | Chicken | None |
| Project | HoloFood | None |
| Sample code | CA03.01A3a | None |
| Marker | Measurement | Units |
|---|---|---|
| Treatment code | CO | None |
| Treatment name | Probiotic | None |
| Marker | Measurement | Units |
|---|---|---|
| Trial code | CA | None |
| Trial description | Trial 1 | None |
| Trial end | 2019-03-11 | None |
| Trial start | 2019-02-04 | None |
Documents written by HoloFood partners and collaborators relevant to Sample SAMEA112905435
