MGYG000320872

Taxonomy

Odoribacter splanchnicus Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Marinifilaceae > Odoribacter > Odoribacter splanchnicus

Cluster representative

MGYG000318121

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318121 on MGnify
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Annotations

MGYG000320872’s cluster representative genome MGYG000318121 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318121 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320872 Copy API Endpoint

MGYG000320872’s cluster representative (MGYG000318121) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318121’s sequence. Because MGYG000320872 has been clustered with MGYG000318121 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320872.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318121

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697601	SAMEA112905311	Prebiotic
1.00	SAMEA10145575	SAMEA112904841	Control
1.00	SAMEA10104967	SAMEA112905126	Prebiotic
1.00	SAMEA10104974	SAMEA112904852	Probiotic
1.00	SAMEA10104993	SAMEA112905352	Prebiotic
1.00	SAMEA7571801	SAMEA112904766	Probiotic
1.00	SAMEA14099422	SAMEA112905377	Control
1.00	SAMEA9449907	SAMEA112905341	Prebiotic
1.00	SAMEA7722478	SAMEA112905150	Control
1.00	SAMEA10104961	SAMEA112904891	Probiotic