MGYG000320847

Taxonomy

UBA11471 sp900542765 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > UBA11471 > UBA11471 > UBA11471 sp900542765

Cluster representative

MGYG000315739

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315739 on MGnify
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Annotations

MGYG000320847’s cluster representative genome MGYG000315739 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315739 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320847 Copy API Endpoint

MGYG000320847’s cluster representative (MGYG000315739) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315739’s sequence. Because MGYG000320847 has been clustered with MGYG000315739 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320847.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315739

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571827	SAMEA112905382	Probiotic
1.00	SAMEA7025289	SAMEA112905253	Control
1.00	SAMEA9449915	SAMEA112905199	Probiotic
1.00	SAMEA9449916	SAMEA112905127	Probiotic
1.00	SAMEA10145601	SAMEA112905257	Control
1.00	SAMEA9449963	SAMEA112905164	Probiotic
1.00	SAMEA9449949	SAMEA112904930	Prebiotic
1.00	SAMEA7571850	SAMEA112904906	Prebiotic
1.00	SAMEA7571841	SAMEA112904773	Probiotic
1.00	SAMEA7025285	SAMEA112905133	Control