MGYG000320803

Taxonomy

UMGS1795 sp900553555 Bacteria > Firmicutes_A > Clostridia > Christensenellales > CAG-552 > UMGS1795 > UMGS1795 sp900553555

Cluster representative

MGYG000314332

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000314332 on MGnify
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Annotations

MGYG000320803’s cluster representative genome MGYG000314332 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000314332 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320803 Copy API Endpoint

MGYG000320803’s cluster representative (MGYG000314332) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000314332’s sequence. Because MGYG000320803 has been clustered with MGYG000314332 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320803.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000314332

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10454449	SAMEA112905153	Prebiotic
1.00	SAMEA9449963	SAMEA112905164	Probiotic
1.00	SAMEA7697626	SAMEA112905069	Probiotic
0.99	SAMEA7025287	SAMEA112905268	Prebiotic
0.99	SAMEA10455477	SAMEA112905240	Probiotic
0.99	SAMEA7025289	SAMEA112905253	Control
0.99	SAMEA9449954	SAMEA112905379	Probiotic
0.99	SAMEA7571778	SAMEA112905122	Control
0.99	SAMEA10145562	SAMEA112905169	Control
0.99	SAMEA7697608	SAMEA112905081	Control