MGYG000320796

Taxonomy

Caccovivens sp905195085 Bacteria > Firmicutes_A > Clostridia > Christensenellales > UBA1242 > Caccovivens > Caccovivens sp905195085

Cluster representative

MGYG000320029

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320029 on MGnify
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Annotations

MGYG000320796’s cluster representative genome MGYG000320029 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320029 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320796 Copy API Endpoint

MGYG000320796’s cluster representative (MGYG000320029) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320029’s sequence. Because MGYG000320796 has been clustered with MGYG000320029 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320796.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320029

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Containment	Sample accession	Animal accession	Treatment
0.22	SAMEA7571839	SAMEA112905234	Control
0.21	SAMEA7697626	SAMEA112905069	Probiotic
0.21	SAMEA10145597	SAMEA112904983	Control
0.21	SAMEA9449835	SAMEA112904998	Probiotic
0.20	SAMEA7571821	SAMEA112905340	Probiotic
0.20	SAMEA7571838	SAMEA112905090	Control
0.20	SAMEA7697597	SAMEA112905231	Probiotic