MGYG000320605

Taxonomy

Mailhella sp900555975 Bacteria > Desulfobacterota_I > Desulfovibrionia > Desulfovibrionales > Desulfovibrionaceae > Mailhella > Mailhella sp900555975

Cluster representative

MGYG000311954

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311954 on MGnify
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Annotations

MGYG000320605’s cluster representative genome MGYG000311954 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311954 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320605 Copy API Endpoint

MGYG000320605’s cluster representative (MGYG000311954) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311954’s sequence. Because MGYG000320605 has been clustered with MGYG000311954 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320605.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311954

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Containment	Sample accession	Animal accession	Treatment
0.25	SAMEA9449920	SAMEA112904974	Probiotic
0.24	SAMEA7025276	SAMEA112904795	Control
0.21	SAMEA10105042	SAMEA112905339	Probiotic
0.21	SAMEA10454448	SAMEA112905051	Prebiotic
0.20	SAMEA9449926	SAMEA112904943	Prebiotic