MGYG000320393

Taxonomy

Onthoplasma Bacteria > Firmicutes_A > Clostridia > Christensenellales > UBA1242 > Onthoplasma

Cluster representative

MGYG000319836

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319836 on MGnify
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Annotations

MGYG000320393’s cluster representative genome MGYG000319836 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319836 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320393 Copy API Endpoint

MGYG000320393’s cluster representative (MGYG000319836) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319836’s sequence. Because MGYG000320393 has been clustered with MGYG000319836 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320393.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319836

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10145562	SAMEA112905169	Control
1.00	SAMEA14095991	SAMEA112904755	Control
1.00	SAMEA10145575	SAMEA112904841	Control
1.00	SAMEA7697586	SAMEA112904836	Prebiotic
1.00	SAMEA14099421	SAMEA112905128	Control
1.00	SAMEA9449956	SAMEA112904759	Probiotic
1.00	SAMEA7571765	SAMEA112905077	Probiotic
1.00	SAMEA7697623	SAMEA112905102	Probiotic
1.00	SAMEA10455477	SAMEA112905240	Probiotic
1.00	SAMEA7025242	SAMEA112905292	Control