HoloFood Data Portal

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MGYG000320239

Details for MGYG000320239, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia merdigallinarum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia > Blautia merdigallinarum
Cluster representative

MGYG000320239

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320239 on MGnify
 Show other genomes in cluster
Annotations

MGYG000320239’s cluster representative genome MGYG000320239 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320239 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320239 Copy API Endpoint
Samples containing this genome

MGYG000320239’s cluster representative (MGYG000320239) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320239’s sequence. Because MGYG000320239 has been clustered with MGYG000320239 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320239.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320239

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Containment Sample accession Animal accession Treatment
0.26 SAMEA10455499 Prebiotic
0.26 SAMEA7571850 Prebiotic
0.25 SAMEA9449863 Prebiotic
0.25 SAMEA7025239 Probiotic
0.25 SAMEA10104927 Prebiotic
0.25 SAMEA9449853 Probiotic
0.25 SAMEA7697630 Control
0.25 SAMEA10455486 Control
0.25 SAMEA10145587 Control
0.25 SAMEA10104959 Prebiotic