HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904980: a HoloFood chicken host

Data available for SAMEA112904980


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has histological data Has histological data
Has host genomic data Has host genomic data
View 8 derived samples
API endpoint
/api/animals/SAMEA112904980 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904980, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.82 g
Average Daily Feed intake: Day 00 - 35 94.41 g
Average Daily Feed intake: Day 07 - 21 76.23 g
Average Daily Feed intake: Day 21 - 35 153.04 g
Average Daily Gain: Day 00 - 07 20 g
Average Daily Gain: Day 00 - 35 61.84 g
Average Daily Gain: Day 07 - 21 55.17 g
Average Daily Gain: Day 21 - 35 89.42 g
Average European Performance Efficiency Factor: Day 00 - 07 183.39 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.382 None
Average Feed to Conversion Ratio: Day 07 - 21 1.382 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 44.97 g
Average body weight at day 07 185 g
Average body weight at day 21 957.35 g
Average body weight at day 35 2209.3 g
European Performance Efficiency Factor: Day 00 - 35 394.9 None
European Performance Efficiency Factor: Day 07 - 21 399.27 None
European Performance Efficiency Factor: Day 21 - 35 507.12 None
FCR (not corrected): Day 00 - 07 1.091 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.553 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.771 None
Feed to Conversion Ratio: Day 00 - 07 1.091 g/g
Feed to Conversion Ratio: Day 00 - 35 1.527 g/g
Feed to Conversion Ratio: Day 21 - 35 1.711 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=96.30 P1=3.70 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 5.79 pH
Litter at Day 21 7.58 pH
Litter at Day 35 8.02 pH
Mean Abdominal fat Yield 1.44 %
Mean Abdominal fat weight 38.83 g
Mean Breast Yield 19.45 %
Mean Breast weight 507.72 g
Mean CRP at Day 07 2.1724 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1966.7 g
Mean Carcass Yield 75.12 %
Mean HPT at Day 07 1.8129 ng/ml
Mean HPT at Day 21 0.70597 ng/ml
Mean HPT at Day 35 0.89459 ng/ml
Mean LPS at Day 07 7.5098 ng/L
Mean LPS at Day 21 4.6164 ng/L
Mean LPS at Day 35 5.3518 ng/L
Mean Legs Yield 19.53 %
Mean Legs weight 511.02 g
Mean TBARS 0.0833 mg MDA/kg
Mean carcass body weight 2622.5 g
Mean feather cortisol at Day 07 12.083 pg/mg
Mean feather cortisol at Day 21 26.573 pg/mg
Mean feather cortisol at Day 35 18.387 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 2.5 %
Mortality without culleds: Day 21 - 35 2.94 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 2.94 %
Pen code CB16 None

Sample metadata

Marker Measurement Units
Animal code CB16.16 None
Breed Cobb None
C-Reactive protein 0.11 pg/ml
Chicken body weight 2309.2 g
Feather cortisol 9.35 pg/mg
Haptoglobin 37.69 ng/ml
Lipopolysaccharide 48.32 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 35 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CE None
Treatment name Prebiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None