MGYG000319806

Taxonomy

Enterousia intestinigallinarum Bacteria > Proteobacteria > Alphaproteobacteria > Rs-D84 > Rs-D84 > Enterousia > Enterousia intestinigallinarum

Cluster representative

MGYG000319963

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319963 on MGnify
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Annotations

MGYG000319806’s cluster representative genome MGYG000319963 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319963 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000319806 Copy API Endpoint

MGYG000319806’s cluster representative (MGYG000319963) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319963’s sequence. Because MGYG000319806 has been clustered with MGYG000319963 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000319806.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319963

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Containment	Sample accession	Animal accession	Treatment
0.28	SAMEA7571843	SAMEA112904832	Prebiotic
0.27	SAMEA10130113	SAMEA112904768	Control
0.26	SAMEA7697608	SAMEA112905081	Control
0.23	SAMEA7571816	SAMEA112904788	Prebiotic
0.21	SAMEA7697583	SAMEA112904905	Probiotic
0.21	SAMEA7571772	SAMEA112905168	Prebiotic
0.20	SAMEA9449916	SAMEA112905127	Probiotic