MGYG000318935

Taxonomy

Bacteroides congonensis Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Bacteroides > Bacteroides congonensis

Cluster representative

MGYG000315924

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315924 on MGnify
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Annotations

MGYG000318935’s cluster representative genome MGYG000315924 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315924 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000318935 Copy API Endpoint

MGYG000318935’s cluster representative (MGYG000315924) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315924’s sequence. Because MGYG000318935 has been clustered with MGYG000315924 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000318935.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315924

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7722476	SAMEA112904871	Control
1.00	SAMEA7025238	SAMEA112905325	Probiotic
1.00	SAMEA7571801	SAMEA112904766	Probiotic
1.00	SAMEA7571793	SAMEA112905321	Prebiotic
1.00	SAMEA14099421	SAMEA112905128	Control
1.00	SAMEA9449894	SAMEA112905203	Probiotic
1.00	SAMEA7025248	SAMEA112905319	Probiotic
1.00	SAMEA10159244	SAMEA112905364	Probiotic
1.00	SAMEA7697583	SAMEA112904905	Probiotic
1.00	SAMEA7025241	SAMEA112905244	Probiotic