HoloFood Data Portal

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MGYG000318577

Details for MGYG000318577, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Onthousia Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Onthousia
Cluster representative

MGYG000318577

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318577 on MGnify
 Show other genomes in cluster
Annotations

MGYG000318577’s cluster representative genome MGYG000318577 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318577 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000318577 Copy API Endpoint
Samples containing this genome

MGYG000318577’s cluster representative (MGYG000318577) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318577’s sequence. Because MGYG000318577 has been clustered with MGYG000318577 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000318577.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318577

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Containment Sample accession Animal accession Treatment
0.75 SAMEA7571765 Probiotic
0.75 SAMEA9449841 Probiotic
0.74 SAMEA7722476 Control
0.74 SAMEA10105022 Probiotic
0.73 SAMEA9449954 Probiotic
0.73 SAMEA9449933 Prebiotic
0.72 SAMEA9449898 Prebiotic
0.72 SAMEA7697584 Control
0.72 SAMEA9449846 Prebiotic
0.72 SAMEA7697592 Control