MGYG000315087

Taxonomy

Prevotella sp000433175 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Prevotella > Prevotella sp000433175

Cluster representative

MGYG000317513

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317513 on MGnify
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Annotations

MGYG000315087’s cluster representative genome MGYG000317513 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317513 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000315087 Copy API Endpoint

MGYG000315087’s cluster representative (MGYG000317513) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317513’s sequence. Because MGYG000315087 has been clustered with MGYG000317513 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000315087.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317513

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.22	SAMEA7571821	SAMEA112905340	Probiotic
0.21	SAMEA7571766	SAMEA112905028	Control
0.21	SAMEA7571788	SAMEA112904903	Control
0.21	SAMEA10105048	SAMEA112905111	Control
0.20	SAMEA10145598	SAMEA112905287	Control