MGYG000314576

Taxonomy

Gallimonas sp900548845 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Gallimonas > Gallimonas sp900548845

Cluster representative

MGYG000311653

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311653 on MGnify
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Annotations

MGYG000314576’s cluster representative genome MGYG000311653 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311653 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000314576 Copy API Endpoint

MGYG000314576’s cluster representative (MGYG000311653) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311653’s sequence. Because MGYG000314576 has been clustered with MGYG000311653 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000314576.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311653

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Containment	Sample accession	Animal accession	Treatment
0.26	SAMEA7571785	SAMEA112904982	Probiotic
0.26	SAMEA14099425	SAMEA112905180	Prebiotic
0.26	SAMEA7697579	SAMEA112904765	Control
0.26	SAMEA7571800	SAMEA112904785	Probiotic
0.26	SAMEA9449864	SAMEA112904860	Control
0.26	SAMEA9449916	SAMEA112905127	Probiotic
0.26	SAMEA7571768	SAMEA112905198	Control
0.26	SAMEA10105068	SAMEA112905002	Prebiotic
0.26	SAMEA7571824	SAMEA112905082	Probiotic
0.26	SAMEA7571779	SAMEA112905087	Prebiotic