HoloFood Data Portal

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MGYG000313854

Details for MGYG000313854, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Enorma massiliensis Bacteria > Actinobacteriota > Coriobacteriia > Coriobacteriales > Coriobacteriaceae > Enorma > Enorma massiliensis
Cluster representative

MGYG000313705

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313705 on MGnify
 Show other genomes in cluster
Annotations

MGYG000313854’s cluster representative genome MGYG000313705 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313705 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313854 Copy API Endpoint
Samples containing this genome

MGYG000313854’s cluster representative (MGYG000313705) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313705’s sequence. Because MGYG000313854 has been clustered with MGYG000313705 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313854.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313705

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Containment Sample accession Animal accession Treatment
0.46 SAMEA10105029 Probiotic
0.45 SAMEA7697576 Prebiotic
0.44 SAMEA10145593 Control
0.44 SAMEA10145601 Control
0.43 SAMEA7025287 Prebiotic
0.40 SAMEA7025289 Control
0.39 SAMEA7697611 Prebiotic
0.38 SAMEA10105025 Prebiotic
0.37 SAMEA7571841 Probiotic
0.37 SAMEA9449952 Probiotic