MGYG000313079

Taxonomy

UBA11471 sp900542765 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > UBA11471 > UBA11471 > UBA11471 sp900542765

Cluster representative

MGYG000315739

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315739 on MGnify
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Annotations

MGYG000313079’s cluster representative genome MGYG000315739 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315739 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313079 Copy API Endpoint

MGYG000313079’s cluster representative (MGYG000315739) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315739’s sequence. Because MGYG000313079 has been clustered with MGYG000315739 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313079.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315739

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA9449942	SAMEA112904956	Control
0.21	SAMEA9449922	SAMEA112904890	Control