MGYG000313067

Taxonomy

Merdivicinus excrementipullorum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Merdivicinus > Merdivicinus excrementipullorum

Cluster representative

MGYG000313892

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313892 on MGnify
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Annotations

MGYG000313067’s cluster representative genome MGYG000313892 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313892 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313067 Copy API Endpoint

MGYG000313067’s cluster representative (MGYG000313892) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313892’s sequence. Because MGYG000313067 has been clustered with MGYG000313892 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313067.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313892

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA7571771	SAMEA112904893	Prebiotic
0.21	SAMEA10104996	SAMEA112904919	Prebiotic
0.21	SAMEA9449831	SAMEA112904791	Control
0.21	SAMEA7571868	SAMEA112904925	Prebiotic
0.21	SAMEA10159246	SAMEA112904950	Prebiotic
0.21	SAMEA10159252	SAMEA112904781	Prebiotic
0.21	SAMEA10104922	SAMEA112905139	Prebiotic
0.21	SAMEA7571774	SAMEA112904884	Control
0.20	SAMEA7571814	SAMEA112904917	Prebiotic
0.20	SAMEA9449921	SAMEA112904834	Control