HoloFood Data Portal

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MGYG000312651

Details for MGYG000312651, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
JAGHEK01 sp017889265 Bacteria > Firmicutes_A > Clostridia > Peptostreptococcales > Peptostreptococcaceae > JAGHEK01 > JAGHEK01 sp017889265
Cluster representative

MGYG000312549

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000312549 on MGnify
 Show other genomes in cluster
Annotations

MGYG000312651’s cluster representative genome MGYG000312549 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000312549 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000312651 Copy API Endpoint
Samples containing this genome

MGYG000312651’s cluster representative (MGYG000312549) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000312549’s sequence. Because MGYG000312651 has been clustered with MGYG000312549 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000312651.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000312549

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Containment Sample accession Animal accession Treatment
1.00 SAMEA10130043 Control
0.97 SAMEA10130009 Prebiotic
0.94 SAMEA10159263 Prebiotic
0.94 SAMEA10130052 Probiotic
0.93 SAMEA7368188 Control
0.93 SAMEA7571817 Control
0.90 SAMEA10130029 Prebiotic
0.90 SAMEA7697613 Prebiotic
0.90 SAMEA10130039 Control
0.89 SAMEA7697576 Prebiotic