MGYG000311861

Taxonomy

Bacteroides fragilis Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Bacteroides > Bacteroides fragilis

Cluster representative

MGYG000318281

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318281 on MGnify
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Annotations

MGYG000311861’s cluster representative genome MGYG000318281 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318281 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311861 Copy API Endpoint

MGYG000311861’s cluster representative (MGYG000318281) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318281’s sequence. Because MGYG000311861 has been clustered with MGYG000318281 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311861.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318281

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697599	SAMEA112904961	Control
1.00	SAMEA7571819	SAMEA112905213	Probiotic
1.00	SAMEA10455487	SAMEA112904975	Control
1.00	SAMEA9449884	SAMEA112904858	Control
1.00	SAMEA10104962	SAMEA112904849	Control
1.00	SAMEA10455502	SAMEA112904914	Probiotic
1.00	SAMEA10105009	SAMEA112905057	Prebiotic
1.00	SAMEA10105010	SAMEA112904968	Prebiotic
1.00	SAMEA14099422	SAMEA112905377	Control
1.00	SAMEA7025269	SAMEA112904942	Probiotic