MGYG000311653

Taxonomy

Gallimonas sp900548845 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Gallimonas > Gallimonas sp900548845

Cluster representative

MGYG000311653

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311653 on MGnify
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Annotations

MGYG000311653’s cluster representative genome MGYG000311653 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311653 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311653 Copy API Endpoint

MGYG000311653’s cluster representative (MGYG000311653) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311653’s sequence. Because MGYG000311653 has been clustered with MGYG000311653 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311653.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311653

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025234	SAMEA112905098	Control
1.00	SAMEA7025242	SAMEA112905292	Control
1.00	SAMEA10145556	SAMEA112904772	Control
1.00	SAMEA10104961	SAMEA112904891	Probiotic
1.00	SAMEA7571801	SAMEA112904766	Probiotic
1.00	SAMEA7722473	SAMEA112905065	Prebiotic
0.99	SAMEA10145560	SAMEA112904810	Control
0.99	SAMEA7722479	SAMEA112905115	Prebiotic
0.99	SAMEA10105013	SAMEA112905048	Control
0.99	SAMEA14095989	SAMEA112904946	Prebiotic