MGYG000311168

Taxonomy

Gallimonas sp900548845 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Gallimonas > Gallimonas sp900548845

Cluster representative

MGYG000311653

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311653 on MGnify
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Annotations

MGYG000311168’s cluster representative genome MGYG000311653 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311653 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311168 Copy API Endpoint

MGYG000311168’s cluster representative (MGYG000311653) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311653’s sequence. Because MGYG000311168 has been clustered with MGYG000311653 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311168.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311653

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.84	SAMEA9449874	SAMEA112905232	Prebiotic
0.83	SAMEA10454445	SAMEA112905269	Probiotic
0.83	SAMEA9449865	SAMEA112904866	Control
0.83	SAMEA9449860	SAMEA112904977	Control
0.83	SAMEA7697601	SAMEA112905311	Prebiotic
0.83	SAMEA10455477	SAMEA112905240	Probiotic
0.83	SAMEA10104911	SAMEA112904777	Probiotic
0.82	SAMEA10145583	SAMEA112904929	Control
0.82	SAMEA9449833	SAMEA112904807	Probiotic
0.82	SAMEA7025251	SAMEA112905290	Control