HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905269: a HoloFood chicken host

Data available for SAMEA112905269


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112905269 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905269, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 21.58 g
Average Daily Feed intake: Day 00 - 35 98.65 g
Average Daily Feed intake: Day 07 - 21 78.15 g
Average Daily Feed intake: Day 21 - 35 161.12 g
Average Daily Gain: Day 00 - 07 18.89 g
Average Daily Gain: Day 00 - 35 64.77 g
Average Daily Gain: Day 07 - 21 56.86 g
Average Daily Gain: Day 21 - 35 95.62 g
Average European Performance Efficiency Factor: Day 00 - 07 161.13 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.374 None
Average Feed to Conversion Ratio: Day 07 - 21 1.374 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 46 g
Average body weight at day 07 178.21 g
Average body weight at day 21 974.24 g
Average body weight at day 35 2313 g
European Performance Efficiency Factor: Day 00 - 35 414.61 None
European Performance Efficiency Factor: Day 07 - 21 413.71 None
European Performance Efficiency Factor: Day 21 - 35 567.5 None
FCR (not corrected): Day 00 - 07 1.151 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.524 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.685 None
Feed to Conversion Ratio: Day 00 - 07 1.143 g/g
Feed to Conversion Ratio: Day 00 - 35 1.523 g/g
Feed to Conversion Ratio: Day 21 - 35 1.685 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=90.91 P1=9.09 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=85.19 P1=14.81 P2=0.00 P3=0.00 P4=0.00 %
Litter at Day 07 7.23 pH
Litter at Day 21 7.52 pH
Litter at Day 35 8.15 pH
Mean Abdominal fat Yield 1.48 %
Mean Abdominal fat weight 40.32 g
Mean Breast Yield 20.25 %
Mean Breast weight 552.35 g
Mean CRP at Day 07 1.2879 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 2107 g
Mean Carcass Yield 77.3 %
Mean HPT at Day 07 0.81562 ng/ml
Mean HPT at Day 21 0.84695 ng/ml
Mean HPT at Day 35 0.83272 ng/ml
Mean LPS at Day 07 6.1533 ng/L
Mean LPS at Day 21 4.7107 ng/L
Mean LPS at Day 35 5.6708 ng/L
Mean Legs Yield 19.86 %
Mean Legs weight 540.47 g
Mean TBARS 0.12 mg MDA/kg
Mean carcass body weight 2724.2 g
Mean feather cortisol at Day 07 14.312 pg/mg
Mean feather cortisol at Day 21 19.388 pg/mg
Mean feather cortisol at Day 35 31.233 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 0 %
Mortality: Day 00 - 35 0 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB24 None

Sample metadata

Marker Measurement Units
Animal code CB24.14 None
Breed Cobb None
C-Reactive protein 0 pg/ml
Chicken body weight 2680.9 g
Feather cortisol 21.13 pg/mg
Haptoglobin 3.96 ng/ml
Lipopolysaccharide 41.81 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 35 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None