MGYG000311084

Taxonomy

Lachnoclostridium_A stercoripullorum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Lachnoclostridium_A > Lachnoclostridium_A stercoripullorum

Cluster representative

MGYG000310585

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000310585 on MGnify
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Annotations

MGYG000311084’s cluster representative genome MGYG000310585 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000310585 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000311084 Copy API Endpoint

MGYG000311084’s cluster representative (MGYG000310585) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000310585’s sequence. Because MGYG000311084 has been clustered with MGYG000310585 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000311084.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000310585

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Containment	Sample accession	Animal accession	Treatment
0.21	SAMEA9449907	SAMEA112905341	Prebiotic
0.21	SAMEA9449867	SAMEA112905056	Control
0.21	SAMEA7697598	SAMEA112905174	Control
0.20	SAMEA7571840	SAMEA112905099	Probiotic
0.20	SAMEA10104926	SAMEA112905372	Prebiotic
0.20	SAMEA7025271	SAMEA112905138	Probiotic