MGYG000310922

Taxonomy

Stercorousia faecigallinarum Bacteria > Cyanobacteria > Vampirovibrionia > Gastranaerophilales > Gastranaerophilaceae > Stercorousia > Stercorousia faecigallinarum

Cluster representative

MGYG000314833

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000314833 on MGnify
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Annotations

MGYG000310922’s cluster representative genome MGYG000314833 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000314833 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000310922 Copy API Endpoint

MGYG000310922’s cluster representative (MGYG000314833) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000314833’s sequence. Because MGYG000310922 has been clustered with MGYG000314833 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000310922.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000314833

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025236	SAMEA112905113	Probiotic
1.00	SAMEA14099422	SAMEA112905377	Control
1.00	SAMEA14099421	SAMEA112905128	Control
1.00	SAMEA9449860	SAMEA112904977	Control
1.00	SAMEA10455473	SAMEA112904945	Probiotic
1.00	SAMEA10455485	SAMEA112904918	Control
1.00	SAMEA9449836	SAMEA112904902	Probiotic
1.00	SAMEA7697575	SAMEA112904887	Control
1.00	SAMEA10104916	SAMEA112904996	Prebiotic
1.00	SAMEA7571788	SAMEA112904903	Control