MGYG000310823

Taxonomy

Faecalibacterium intestinipullorum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Faecalibacterium > Faecalibacterium intestinipullorum

Cluster representative

MGYG000318274

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318274 on MGnify
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Annotations

MGYG000310823’s cluster representative genome MGYG000318274 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318274 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000310823 Copy API Endpoint

MGYG000310823’s cluster representative (MGYG000318274) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318274’s sequence. Because MGYG000310823 has been clustered with MGYG000318274 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000310823.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318274

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Containment	Sample accession	Animal accession	Treatment
0.20	SAMEA7571774	SAMEA112904884	Control
0.20	SAMEA10105037	SAMEA112904745	Probiotic
0.20	SAMEA10104941	SAMEA112904809	Probiotic
0.20	SAMEA7025282	SAMEA112905191	Control
0.20	SAMEA7025260	SAMEA112905317	Prebiotic
0.20	SAMEA10105009	SAMEA112905057	Prebiotic