MGYG000310417

Taxonomy

Prevotella sp000433175 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Prevotella > Prevotella sp000433175

Cluster representative

MGYG000317513

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317513 on MGnify
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Annotations

MGYG000310417’s cluster representative genome MGYG000317513 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317513 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000310417 Copy API Endpoint

MGYG000310417’s cluster representative (MGYG000317513) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317513’s sequence. Because MGYG000310417 has been clustered with MGYG000317513 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000310417.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317513

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Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA10130076	SAMEA112905262	Prebiotic
0.99	SAMEA7571863	SAMEA112905012	Probiotic
0.99	SAMEA7025283	SAMEA112904873	Control
0.98	SAMEA10130088	SAMEA112904832	Prebiotic
0.93	SAMEA7025248	SAMEA112905319	Probiotic
0.93	SAMEA10145597	SAMEA112904983	Control
0.87	SAMEA10105056	SAMEA112904738	Prebiotic
0.86	SAMEA10105047	SAMEA112905233	Control
0.84	SAMEA7697609	SAMEA112905326	Probiotic
0.75	SAMEA10105073	SAMEA112905137	Prebiotic