MGYG000309852

Taxonomy

UBA11471 sp900542765 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > UBA11471 > UBA11471 > UBA11471 sp900542765

Cluster representative

MGYG000315739

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000315739 on MGnify
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Annotations

MGYG000309852’s cluster representative genome MGYG000315739 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000315739 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000309852 Copy API Endpoint

MGYG000309852’s cluster representative (MGYG000315739) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000315739’s sequence. Because MGYG000309852 has been clustered with MGYG000315739 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000309852.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000315739

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697613	SAMEA112905262	Prebiotic
1.00	SAMEA9449923	SAMEA112904816	Probiotic
1.00	SAMEA7571870	SAMEA112905255	Prebiotic
1.00	SAMEA9449935	SAMEA112905305	Control
1.00	SAMEA9449927	SAMEA112904937	Prebiotic
1.00	SAMEA9449947	SAMEA112905276	Prebiotic
1.00	SAMEA9449928	SAMEA112904898	Prebiotic
1.00	SAMEA7571863	SAMEA112905012	Probiotic
1.00	SAMEA10105033	SAMEA112904789	Prebiotic
1.00	SAMEA9449950	SAMEA112904761	Prebiotic