MGYG000309743

Taxonomy

Scatenecus sp900554095 Bacteria > Cyanobacteria > Vampirovibrionia > Gastranaerophilales > Gastranaerophilaceae > Scatenecus > Scatenecus sp900554095

Cluster representative

MGYG000311594

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000311594 on MGnify
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Annotations

MGYG000309743’s cluster representative genome MGYG000311594 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000311594 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000309743 Copy API Endpoint

MGYG000309743’s cluster representative (MGYG000311594) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000311594’s sequence. Because MGYG000309743 has been clustered with MGYG000311594 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000309743.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000311594

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025234	SAMEA112905098	Control
1.00	SAMEA10145556	SAMEA112904772	Control
1.00	SAMEA7025239	SAMEA112905167	Probiotic
1.00	SAMEA14095989	SAMEA112904946	Prebiotic
1.00	SAMEA10455477	SAMEA112905240	Probiotic
1.00	SAMEA7025245	SAMEA112904855	Probiotic
1.00	SAMEA7571767	SAMEA112905143	Control
1.00	SAMEA7697584	SAMEA112904877	Control
0.99	SAMEA10104951	SAMEA112905237	Prebiotic
0.99	SAMEA9449895	SAMEA112905248	Probiotic