MGYG000309242

Taxonomy

Eubacterium_R faecavium Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Eubacterium_R > Eubacterium_R faecavium

Cluster representative

MGYG000308046

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000308046 on MGnify
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Annotations

MGYG000309242’s cluster representative genome MGYG000308046 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000308046 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000309242 Copy API Endpoint

MGYG000309242’s cluster representative (MGYG000308046) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000308046’s sequence. Because MGYG000309242 has been clustered with MGYG000308046 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000309242.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000308046

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Containment	Sample accession	Animal accession	Treatment
0.22	SAMEA10455476	SAMEA112904798	Probiotic
0.22	SAMEA7571781	SAMEA112904970	Control
0.21	SAMEA9449904	SAMEA112904951	Control