MGYG000308806

Taxonomy

Ventrisoma faecale Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Ventrisoma > Ventrisoma faecale

Cluster representative

MGYG000318167

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318167 on MGnify
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Annotations

MGYG000308806’s cluster representative genome MGYG000318167 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318167 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308806 Copy API Endpoint

MGYG000308806’s cluster representative (MGYG000318167) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318167’s sequence. Because MGYG000308806 has been clustered with MGYG000318167 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308806.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318167

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697631	SAMEA112905241	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
1.00	SAMEA7571841	SAMEA112904773	Probiotic
1.00	SAMEA7571827	SAMEA112905382	Probiotic
1.00	SAMEA7571851	SAMEA112905337	Prebiotic
1.00	SAMEA10145575	SAMEA112904841	Control
1.00	SAMEA10104937	SAMEA112904876	Prebiotic
1.00	SAMEA7697592	SAMEA112904737	Control
1.00	SAMEA7025277	SAMEA112905229	Control
0.99	SAMEA7571787	SAMEA112904931	Probiotic