HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

MGYG000308744

Details for MGYG000308744, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Blautia merdipullorum Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Blautia > Blautia merdipullorum
Cluster representative

MGYG000319549

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319549 on MGnify
 Show other genomes in cluster
Annotations

MGYG000308744’s cluster representative genome MGYG000319549 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319549 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308744 Copy API Endpoint
Samples containing this genome

MGYG000308744’s cluster representative (MGYG000319549) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319549’s sequence. Because MGYG000308744 has been clustered with MGYG000319549 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308744.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319549

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Containment Sample accession Animal accession Treatment
0.83 SAMEA10145575 Control
0.82 SAMEA9449862 Prebiotic
0.80 SAMEA7571793 Prebiotic
0.80 SAMEA9449860 Control
0.79 SAMEA9449941 Prebiotic
0.79 SAMEA7571858 Probiotic
0.78 SAMEA7025274 Probiotic
0.78 SAMEA9449954 Probiotic
0.76 SAMEA9449873 Prebiotic
0.76 SAMEA9449950 Prebiotic