MGYG000308688

Taxonomy

Negativibacillus faecipullorum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Negativibacillus > Negativibacillus faecipullorum

Cluster representative

MGYG000308854

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000308854 on MGnify
 Show other genomes in cluster

Annotations

MGYG000308688’s cluster representative genome MGYG000308854 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000308854 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308688 Copy API Endpoint

MGYG000308688’s cluster representative (MGYG000308854) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000308854’s sequence. Because MGYG000308688 has been clustered with MGYG000308854 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308688.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000308854

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA10105012	SAMEA112905346	Control
0.99	SAMEA14099421	SAMEA112905128	Control
0.99	SAMEA7722478	SAMEA112905150	Control
0.99	SAMEA7571795	SAMEA112905322	Prebiotic
0.98	SAMEA10104941	SAMEA112904809	Probiotic
0.98	SAMEA10104987	SAMEA112905189	Control
0.98	SAMEA7025249	SAMEA112904823	Prebiotic
0.98	SAMEA10104967	SAMEA112905126	Prebiotic
0.98	SAMEA7571800	SAMEA112904785	Probiotic
0.98	SAMEA7025281	SAMEA112904979	Probiotic