HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112905346: a HoloFood chicken host

Data available for SAMEA112905346


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has metabolomic data Has metabolomic data
Has inflammatory markers data Has inflammatory markers data
Has histological data Has histological data
Has host genomic data Has host genomic data
View 8 derived samples
API endpoint
/api/animals/SAMEA112905346 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112905346, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 20.46 g
Average Daily Feed intake: Day 00 - 35 79.99 g
Average Daily Feed intake: Day 07 - 21 60.51 g
Average Daily Feed intake: Day 21 - 35 133.77 g
Average Daily Gain: Day 00 - 07 18.51 g
Average Daily Gain: Day 00 - 35 53.29 g
Average Daily Gain: Day 07 - 21 48.57 g
Average Daily Gain: Day 21 - 35 75.39 g
Average European Performance Efficiency Factor: Day 00 - 07 159.13 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.246 None
Average Feed to Conversion Ratio: Day 07 - 21 1.246 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 38.82 g
Average body weight at day 07 168.42 g
Average body weight at day 21 848.44 g
Average body weight at day 35 1903.8 g
European Performance Efficiency Factor: Day 00 - 35 337.23 None
European Performance Efficiency Factor: Day 07 - 21 389.89 None
European Performance Efficiency Factor: Day 21 - 35 424.83 None
FCR (not corrected): Day 00 - 07 1.137 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.505 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.774 None
Feed to Conversion Ratio: Day 00 - 07 1.105 g/g
Feed to Conversion Ratio: Day 00 - 35 1.501 g/g
Feed to Conversion Ratio: Day 21 - 35 1.774 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=90.63 P1=9.38 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=69.23 P1=19.23 P2=11.54 P3=0.00 P4=0.00 %
Litter at Day 07 7.57 pH
Litter at Day 21 8.34 pH
Litter at Day 35 7.01 pH
Mean Abdominal fat Yield 1.4 %
Mean Abdominal fat weight 32.15 g
Mean Breast Yield 20.38 %
Mean Breast weight 464.78 g
Mean CRP at Day 07 1.5507 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1756.1 g
Mean Carcass Yield 76.98 %
Mean HPT at Day 07 0.73395 ng/ml
Mean HPT at Day 21 0.73508 ng/ml
Mean HPT at Day 35 0.96866 ng/ml
Mean LPS at Day 07 6.4805 ng/L
Mean LPS at Day 21 5.0479 ng/L
Mean LPS at Day 35 5.811 ng/L
Mean Legs Yield 20.24 %
Mean Legs weight 462.1 g
Mean TBARS 0.1267 mg MDA/kg
Mean carcass body weight 2281.7 g
Mean feather cortisol at Day 07 10.627 pg/mg
Mean feather cortisol at Day 21 8.4017 pg/mg
Mean feather cortisol at Day 35 7.9133 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 2.5 %
Mortality: Day 00 - 35 2.5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CB22 None

Sample metadata

Marker Measurement Units
Animal code CB22.03 None
Breed Ross None
C-Reactive protein 2.99 pg/ml
Chicken body weight 168.1 g
Feather cortisol 8.94 pg/mg
Haptoglobin 0 ng/ml
Lipopolysaccharide 46.76 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Female None

Treatment metadata

Marker Measurement Units
Treatment code CC None
Treatment name Control None

Trial metadata

Marker Measurement Units
Trial code CB None
Trial description Trial 2 None
Trial end 2019-05-19 None
Trial start 2019-04-21 None